To cite the SNP/indel/SV catalogs, please use:

Keane et al. (2011) Mouse genomic variation and its effect on phenotypes and gene regulation. Nature. Volume 477. doi:10.1038/nature10413

Doran et al. (2016) Deep genome sequencing and variation analysis of 13 inbred mouse strains defines candidate phenotypic alleles, private variation and homozygous truncating mutations. Genome Biology. 17, 167. https://dx.doi.org/10.1186/s13059-016-1024-y

To cite the reference genomes, please use:

Lilue et al. (2018) Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci. Nat Genetics. Volume 50. doi:10.1038/s41588-018-0223-8